
332 pages · 2025
Molecular Genetics, Structures, Mechanisms, and Functions
Volume 2: Applications and Exploring the Nucleus
By Tariq Ahmad Bhat · Abdul Rauf Shakoori · Jameel M. Al-Khayri
- Published
- June 30, 2025
- Imprint
- Apple Academic Press
- Edition
- 1st Edition
- ISBN
- 9781003609803
Overview
About this book
This new comprehensive two-volume set covers all the classical and advanced aspects of molecular genetics and gene manipulation, putting this information in one place for beginners, experts, and those venturing into the fascinating science of molecular biology.
Volume 2: Applications and Exploring the Nucleus continues the coverage of generic engineering, dealing with the concept of genes, their relationship with chromosomes, and their functional manifestation to the benefit of organisms at large and for human in particular. Topics include Mendel’s Laws of Inheritance, which explains the inheritance of traits visible through generations; , genome diversity and evolution genetic protein synthesis, recombination and evolution of DNA, transposable elements in genetics, chromosomal aberrations, and more. The volume also addresses genetic engineering in agricultural science for increased crop yields, to reduce costs for food or drug production, to reduce the need for pesticides, to enhance crop quality, etc.
Volume 1: Principles of Gene Manipulation and Genomics provides an overview of the future of genetic engineering and delves into the role of biotechnology and its applications in genetic engineering. It discusses the tools of recombinant technology, which have brought about revolution in our understanding of various complex biological phenomena. Chapters cover mutagenesis, construction, and sequencing of DNA libraries along with applications of genetic engineering for improving health, preventing genetic diseases, enhancing food resources, managing environmental bioremediation, and more. Topics include genetic engineering tools for restriction enzymes and vectors, gene and cell division, mutation detection and screening in plants, population genetics, sexuality in bacteria, and more. Several chapters focus on the tools of recombinant technology, such as restriction enzymes, vectors, etc., that have paved the way for creating organisms of choice and opened new horizons in the field of medicine, agriculture, and industry for human welfare.
Providing a wealth of knowledge, Molecular Genetics, Structures, Mechanisms, and Functions will be a valuable asset for researchers and scientists working in the field of genetics, molecular genetics, mutation breeding and plant breeding, as well as for faculty and students.
Subjects
Bioscience
Inside the book
Table of contents
Select a chapter to read its abstract.
Chapter Chapter 1Mendel's Laws of Inheritance
Pages: 17
Inheritance can be defined as the process of transferring genetic information from the parents to offsprings in living organisms. The whole process of heredity is dependent upon inheritance and it is the reason that the offsprings are similar to parents in their morphological, physiological, and biochemical traits. This simply means that due to inheritance, the members of the same family possess similar characteristics. It was only during the mid-19th century that people started to understand inheritance in a logical and scientific way. This understanding of inheritance was made possible by a scientist named Gregor Mendel, who formulated certain laws to understand the mechanism of inheritance. As a tribute to Mendel’s contribution, he was given the title of “Father of Genetics” and his laws are known as Mendel’s laws of inheritance. In this chapter, a thorough review of the principles of genetic inheritance formulated by him is presented.
Chapter Chapter 2Linkage, Crossing Over, and Recombination
Pages: 46
It is important to note that all genes residing on a single chromosome are considered linked to each other. The mechanism responsible for the inheritance of linked genes within the same linkage group is referred to as “linkage.” In contrast, crossing over leads to the emergence of new traits through the exchange of genetic segments between chromosomes, serving as a source of genetic diversity. However, it is worth noting that linkage tends to decrease the likelihood of variability in gametes unless crossing over takes place. Genetics encompasses the investigation of hereditary traits and the diversity that arises from them. Recombination is the mechanism through which DNA fragments break and recombine, resulting in the appearance of novel varieties of alleles. This method fosters genetic diversity at the genetic level, reflecting variations in DNA patterns among different organisms. RNA recombination is a crucial factor in genetic changes associated with the emergence of RNA viruses. Genomic recombination significantly presents the development of entirely new lineages, the development of host tropism, environmental changes, virulence, and disease. It encompasses both intra-and intrachromosomal recombination. During sexual reproduction, the interaction of genomic data between different chromatids of homologous chromosomes, understood as a chromosomal crossover, shows the formation of recombinant chromosomes. Gene change appears when one DNA sequence replaces a homologous sequence, resulting in its identical nature. Recombination often exhibits sex dimorphism in both sex chromosomes and autosomes. Viral recombination takes place when viruses from distinct parent strains contaminate the identical host tissue and combine their genetic material during replication, giving rise to progeny viruses that inherit genes from both parents. The process of evolution causes changes in the genetic makeup of populations over time. Genetic diversity and alterations in allele frequencies are necessary for evolutionary processes to occur.
Chapter Chapter 3Structure of Gene
Pages: 16
A gene is a fundamental unit of heredity in living organisms, typically comprising DNA sequences that encode the instructions necessary for cellular function, growth, and development. Structurally, a gene consists of exons, which code for proteins, and introns, which are noncoding regions interspersed between exons. Regulatory sequences, such as promoters, enhancers, and silencers, control gene expression by influencing the transcription process. The coding region of the gene is transcribed into mRNA, which is then translated into proteins, the functional products of genes. Various regulatory elements and epigenetic factors, including DNA methylation and histone modifications, also play critical roles in gene activity, determining when and where specific genes are expressed. The complexity of gene structure, along with the interactions between coding sequences and regulatory regions, is vital to understanding gene function, regulation, and the intricate mechanisms underlying genetic inheritance and phenotypic variation.
Chapter Chapter 4Genome Diversity and Evolution
Pages: 39
The genome encompasses the totality of an organism’s genetic data, which is essential for its functioning. It is stored within living organisms as chromosomes and large DNA molecules. Genomic diversity refers to the collective set of genetic characteristics that constitute the genetic makeup of a species. It can vary significantly across species and within species and plays a role in the species’ survival. Genetic diversity should not be confused with genetic variation, which refers to the propensity of hereditary traits to change. Natural selection acts upon traits that enable populations to adapt to changing environments, utilizing the genetic deviation present in the population. The capacity of a population to adjust to environmental changes depends on the availability of acceptable genetic diversity. A population with more genetic diversity has a higher chance of adapting and surviving, whereas one with less genetic diversity is more susceptible to changes like climate change or the emergence of new illnesses. These evolutionary changes arise from mutations that introduce genomic variations and give rise to individuals with altered biological processes or physical characteristics. Charles Darwin proposed the concept of common ancestry and the ability of species to change over time, resulting in the emergence of new species from existing ones. Each species possesses its own unique set of inherited genetic variations, gradually accumulated over extensive time periods from ancestral predecessors. Darwin’s significant works, On the Origin of Species (1859) and The Descent of Man (1871), highlight his argument that the diversity of 82organisms and their traits can be attributed to natural processes. Speciation, the process of generating new distinct species, occurs through genetic modifications and the development of reproductive barriers between populations. Different types of speciation, such as peripatric, allopatric, and sympatric speciation, contribute to the formation of unique species. Various factors impact the process of evolution, including gene flow (the transfer of genes among populations), genetic drift (the random loss of rare alleles), migration, and natural selection. Mutations occur when a gene in DNA undergoes damage or alteration that changes the genetic information it carries. Mutagens are substances that have the ability to modify the physical properties and genetic information of DNA genes. When a damaged or altered gene is transcribed, the resulting mRNA carries a new message. Natural selection occurs when the environment favors organisms with beneficial features. Beneficial heritable mutations that confer advantages to a species will persist in nature, while unfavorable mutations will eventually be eliminated.
Chapter Chapter 5Recombination and Evolution
Pages: 36
Recombination is the mechanism through which DNA fragments break and recombine, resulting in the appearance of novel varieties of alleles. This method fosters genetic diversity at the genetic level, reflecting variations in DNA patterns among different organisms. RNA recombination is a crucial factor in genetic changes associated with the emergence of RNA viruses. Genomic recombination significantly presents the development of entirely new lineages, the development of host tropism, environmental changes, virulence, and disease. It encompasses both intra- and interchromosomal recombination. During sexual reproduction, the interaction of genomic data between different chromatids of homologous chromosomes, understood as a chromosomal crossover, shows the formation of recombinant chromosomes. Gene change appears when one DNA sequence replaces a homologous sequence, resulting in its identical nature. Recombination often exhibits sex dimorphism in both sex chromosomes and autosomes. Viral recombination takes place when viruses from distinct parent strains contaminate the identical host tissue and combine their genetic material during replication, giving rise to progeny viruses that inherit genes from both parents. The process of evolution causes changes in the genetic makeup of populations over time. Genetic diversity and alterations in allele frequencies are necessary for evolutionary processes to occur. Prezygotic and postzygotic barriers act as obstacles, separating species from each other and preventing copulation or the presentation of possible, productive progeny. Speciation is the proceeding 122through which unique species emerge, driven by the divergence and genetic isolation of populations within a species, resulting in reproductive barriers between them. Genetic drift, gene flow, migration, mutation, and selection are some of the factors that influence species evolution.
Chapter Chapter 6Mutations, Mutagens, and Types
Pages: 18
Since mutations are the random and heritable changes in any organism’s genetic architecture, they play a pivotal role in the process of evolution and diversification of species. Mutants that are more suited to their environment—natural or artificial—have a selective advantage. Mutation can be of autonomous or induced and wild species has been greatly aided by mutation in their domestication. Induced mutations using different kinds of mutagens resulted in development of thousands of new mutant varieties in several crop plants which are being used as food, feed, fodder, and fiber. Now, with the aid of modern biological techniques, it is possible to induce site-directed mutagenesis that ultimately reduced the time-consuming process of induction of random mutations, identification, and screening. In vitro culture techniques, next-generation sequencing techniques, and phenotypic screening methods enhanced the accuracy of generation of desired mutants with specific characteristics. This chapter looks into the current state of mutation breeding for crop enhancement and evaluates its potential future paths.
Chapter Chapter 7Genetic Engineering and Agricultural Science
Pages: 34
Genetic engineering has become a very important part of modern agricultural biotechnology approaches. In the past few years, many transgenic crops have been modified to fulfill the two fundamental necessities of agriculture. Healthy food and durable crops that can survive under limiting and stressful conditions. Plants have been genetically altered to enhance their ability to tolerate greater biological and environmental stresses or improve their physiological traits, thereby increasing their yield potential. Furthermore, the scientific community has invested significant time and effort in identifying genes and quantitative trait loci (QTL) that can enhance plant characteristics. Economically important crops have been modified via overexpression or downregulation of target genes and QTL. This chapter offers an outlook on recent advances in agricultural science and practices driven by genetic engineering, as well as examines the effect of transgenic crops on the diversity of flora and fauna along with human health. Additionally, the attitudes and opinions of farmers regarding GM crops are also part of the discussion.
Chapter Chapter 8Protein Synthesis
Pages: 38
Three-base sequence “words” used to “read” DNA are utilized to direct the production of certain amino acids. These three-base triplets, also known as codons, are arranged along the DNA in an orderly manner. A gene is a section of DNA that is linear and codes for a specific protein. The collection of all the genes found in the human population is known as the human genome. Even though just a small quantity of DNA may be observed in the mitochondria, and while the cytoplasm is where almost all protein synthesis occurs, the nucleus of the cell houses the majority of the DNA. The process of making proteins from polypeptides is the process of creating chains of amino acids. It is the second component of the essential genetics dogma. It takes place in the cytoplasm’s ribosomes. The process of translation involves decoding the genetic code from mRNA to produce proteins. Initiation, elongation, and termination are the three stages that make up the overall translation process. Protein synthesis is followed by proteolysis and protein folding. After translation and the creation of peptide bonds, a polypeptide chain is exposed to an enzymatic procedure called posttranslational modification. To provide the best cellular localization and performance, the side chains and terminals of the polypeptide might be altered. Polypeptide chains fold into secondary and tertiary structures during protein folding.
Chapter 9Transposable Elements
Pages: 30
Transposable elements (TEs), transposons, and jumping genes are parts of the genome that can move from one location to another. The first TEs discovered in bacteria are insertion sequences or IS elements. These transposons turn out to be the most basic ones. There is roughly 45% of it in the human genome. It inserts itself in a variety of places.
Chapter Chapter 10Chromosomal Aberrations
Pages: 32
The study of chromosomes and chromosomal aberrations is known as Cytogenetics (Gersen, 2013). These aberrations in chromosomes can be both structural and numerical. Human beings have 23 pairs of chromosomes, out of which 22 pairs of chromosomes are homologous autosomes. The remaining set is of sex chromosomes, which are homozygous X in females and heterozygous X and Y in males (Milani and Tadi, 2022). The anomalies that arise in the number of chromosomes are called numerical abnormalities and they are more common than the structural abnormalities, which as the name suggests occur due to changes in chromosomal structure (McFeely,1993) According to the World Health Organization, 240,000 newborns die every year within a month due to congenital disorders. Additionally, congenital disorders contribute to an additional 170,000 child deaths occurring between the ages of one month and five years. Numeric and structural chromosomal abnormalities are present in roughly 0.6% of newborns (Shaffer and Lupski, 2000). These abnormalities often lead to physical abnormalities, birth defects, and developmental impairments. These observable traits result from an unequal distribution of one or more genes that are sensitive to changes in their quantity on a specific chromosome or segment of a chromosome. Such gene imbalances can have severe consequences, being responsible for 25% of all cases of miscarriage and stillbirth, as well as 50–60% of miscarriages occurring during the first trimester (Hassold et al., 1980).